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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850051.1_cds_XP_016511038.1_23817
CDS Infomation

[gene=LOC107828263] [db_xref=GeneID:107828263] [protein=caffeoylshikimate esterase-like] [protein_id=XP_016511038.1] [location=join(140796..141080,141455..141484,142365..142494,142607..142753,142932..143062,143403..143540,143816..143914,144012..144230)] [gbkey=CDS]
Sequence

ATGGACCTTACTCTAACTTCCACTTTCCGACCATTTTTACAGCCTGAATTCTCAGTTATT
CACCGGAAAATTAACCAACCCATTATTCTCCATCATAATTTGAAGTGTAAACCATTTTCA
AAGAATAAAGTGATTACTATGGCAATTAAAAAGGCAAGAATTGAAGGTGTAAGTGAAGCA
TTAAATGAAATTGCTTCACAGAATTTGGATCATGCTCCTGCTAGAAGAAGGGTTCGATCA
GCTTTTATTGCTACTCAACAGCAGCTTGATCATATCTTATTTAAGATGGCTCCAGCTGAT
ATCAGAGAAGATGAGTGGTATGAAGCAAATTCGAAAGGCCAACAGATTTTCTGTAAAAGT
TGGCTGCCAAAGCCAGGGGTACGAATTAAAGGTGCTTTGTGCTTTTGTCATGGATATGGT
GATACCTGCACTTTCTTCTTTGAAGGTATTGCAAGGTTTATTTCGGCCTCTGGCTATGCT
GTCTATGCTATTGACCATCCCGGTTTTGGCCTCTCGGATGGTTTGCATGGATATATTCCT
GAATTTGATGGTATAGTTGACAATGTCAATGAGCAGTATGTGAAGATAAAAGGTAGGCCG
GAAATTAGCGGTCTTCCCTGCTTTATATTTGGGCAGTCAATGGGAGGTGCAATTGCTCTA
AAAGCTCTTCTTAAGGAACCACGTCAATGGGATGGAATTGTCCTTGTTGCGCCAATGTGC
AAAATTGCAGAAGACATGACGCCACCATTTCTCCTGCAGAAAGTCTTGATTTTTGTGTCT
AACATTACGCCACAAGCAAAGATAGTCCCTACTAAAGATTTGGCAGAATTGGCATTCAGG
GAGTTCAAGAAAAGGAAAATGGCTCCATACAATGTAATCTCTTACTCCGATAAAACACGT
GTAAAAACTGCTGTGGAACTCTTAAACGCTACAAAATACATCGAATCACAAGTGGACAAG
GTGGCATCCCCGATGCTCATTCTTCACGGAGCTGCAGATAAAGTGACGGATCCTCTCGTG
AGTCAGTATCTGTATGATAAGTCCTCGAGCAGCGACAAAACTCTTAAGCTCTATGAAGGA
GGCTATCACTGTATTCTTGAAGGTGAACCTGATGATAGAATTCTTACTGTGCTCAATGAC
ATTATCTCATGGCTTGATTCTCGTTGCTCTCCGAATTAG

Peptide Sequence

PEP ID

XP_016511038.1
PEP Infomation

PREDICTED: caffeoylshikimate esterase-like [Nicotiana tabacum]
Sequence

MDLTLTSTFRPFLQPEFSVIHRKINQPIILHHNLKCKPFSKNKVITMAIKKARIEGVSEA
LNEIASQNLDHAPARRRVRSAFIATQQQLDHILFKMAPADIREDEWYEANSKGQQIFCKS
WLPKPGVRIKGALCFCHGYGDTCTFFFEGIARFISASGYAVYAIDHPGFGLSDGLHGYIP
EFDGIVDNVNEQYVKIKGRPEISGLPCFIFGQSMGGAIALKALLKEPRQWDGIVLVAPMC
KIAEDMTPPFLLQKVLIFVSNITPQAKIVPTKDLAELAFREFKKRKMAPYNVISYSDKTR
VKTAVELLNATKYIESQVDKVASPMLILHGAADKVTDPLVSQYLYDKSSSSDKTLKLYEG
GYHCILEGEPDDRILTVLNDIISWLDSRCSPN

Transcript Sequence

Gene sequence data has not been registered.